PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024982772.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 211aa MW: 24374.9 Da PI: 8.9188 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 71.5 | 1.9e-22 | 51 | 135 | 2 | 89 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY++YA ++GF +r+ +s+ks+r+g+i++r + C e +++++++ +++++ r gC a++ vk+ek g+w+v k++ eHnH+l XP_024982772.1 51 FYDDYAGRMGFVTRVLSSRKSERDGTIISRGLGCRGESENHKNESI---MVQKKNKGREGCMAMILVKREKPGNWVVRKFVREHNHPL 135 9*********************************999999888776...78888899*****************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MDADKKQMLL EDDIEKLEVP VQGELSLCEA DKNQEPCEGM LFDSEEAARA FYDDYAGRMG 60 FVTRVLSSRK SERDGTIISR GLGCRGESEN HKNESIMVQK KNKGREGCMA MILVKREKPG 120 NWVVRKFVRE HNHPLHVSIS KRRPAFDEKD KRIQELTAEL RVKKRLSAAY REQLLALMKD 180 VDGHNEHIST KVQLVRNNLK KLEENGHIHH R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 3e-57 | FAR1 family protein |