PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024982302.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 309aa MW: 35519.5 Da PI: 6.3565 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 164.3 | 4.4e-51 | 10 | 138 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF P+deelv++yL kk++++++ ++ e+d++++ePw+Lp+++k +++ewyfFs rd+kyatg r+nrat+sgyWkatgkd++v++ XP_024982302.1 10 LPPGFRFYPSDEELVCHYLYKKIANEDVLK-GTLVEIDLHTCEPWQLPETAKLNSSEWYFFSFRDRKYATGYRTNRATTSGYWKATGKDRTVVDP 103 79************************9655.78***************88888999*************************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 +g +g++ktLvfyk+rap+g+kt W+mhe+rle XP_024982302.1 104 rSGVIIGMRKTLVFYKNRAPNGVKTGWIMHEFRLE 138 67778***************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence |
MGLRDIGATL PPGFRFYPSD EELVCHYLYK KIANEDVLKG TLVEIDLHTC EPWQLPETAK 60 LNSSEWYFFS FRDRKYATGY RTNRATTSGY WKATGKDRTV VDPRSGVIIG MRKTLVFYKN 120 RAPNGVKTGW IMHEFRLENP HIPPKEDWVL CRVFYKAKGD NSNEHSPQHM YHNTASHDGV 180 TSPNLGTSPT TISTGCQPPP CIHHHHHPPF TTTNSSTTLS NQTPTPPIHH QNYFGISPQQ 240 YNHQNLLQLS QDATLKESTD QMFMSSNNKC DDQYGFFYDM VFEDYVPSHN LQDMELDDDD 300 NDNGIVFYE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28530.1 | 1e-90 | NAC family protein |