PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024982072.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | HSF | ||||||||
Protein Properties | Length: 351aa MW: 40302.5 Da PI: 5.7248 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 114.7 | 6e-36 | 61 | 153 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++d+++++++sws+ g+sfvv+d++ f++++Lp+yFkh+nf+SF+RQLn+YgF+k++ + weF+++ F kg+++ l++ XP_024982072.1 61 FLTKVYEMVDDPNFDHILSWSRGGQSFVVWDTQAFSTNLLPRYFKHNNFSSFIRQLNTYGFRKIDPDI---------WEFANEAFLKGQRHILKN 146 9***************************************************************9876.........****************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 ikr+k++ XP_024982072.1 147 IKRRKTS 153 ****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MDPFYSVVKE EYPLGGSSST VGGSGSTVPE KQPVVVEVPQ IMVMQVPQPM EGLHDSGPPP 60 FLTKVYEMVD DPNFDHILSW SRGGQSFVVW DTQAFSTNLL PRYFKHNNFS SFIRQLNTYG 120 FRKIDPDIWE FANEAFLKGQ RHILKNIKRR KTSSHPPPQQ EANNLCVEVG TFGLDGEVER 180 LRRDKRVLMT ELVKLRQQQQ NTRSHLKEME LRLKGTEKKR QKMMGFLAKA LQNPEFIQKL 240 ASHGERKNLA EAFMKERRKR PIDHGSNRVN IMESSETSNE FGDLSELEEL ALEMQGVGRL 300 KRSQEEEAKD LSGVQEFDEE FWEELFSERF DIAGSEDGEA DRLDFLGSNA K |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 144 | 150 | LKNIKRR |
2 | 182 | 222 | RRDKRVLMTELVKLRQQQQNTRSHLKEMELRLKGTEKKRQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22830.1 | 1e-105 | HSF family protein |