PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024981931.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family G2-like
Protein Properties Length: 322aa    MW: 35328.5 Da    PI: 6.3218
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024981931.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.15.5e-30153206155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl+Wtp+LH+rFv++v++L G ++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  XP_024981931.1 153 RPRLVWTPQLHKRFVDVVAHL-GVKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 206
                     59*******************.9*******************************8 PP
2Myb_DNA-binding48.42.1e-15155205148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vd+v+ lG +   +ktI++ m+ +g+t++++ s++qky+
   XP_024981931.1 155 RLVWTPQLHKRFVDVVAHLGVKnaVPKTIMQLMNvEGLTRENVASHLQKYR 205
                      789***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MGEEVRITDY DVGGDDDDRV LEWEAGLPTL DDLMPLSQSL VPPELASAFS VMPEPRRSMI  60
DVNRASQNTL TNLRGQSMKQ PLNKFNGFKS FGEDKGDEMV MEGEETADLT GDGSDSRKLR  120
RVDSGGAGAV GGAGEEADSA LRADDSSTRT SKRPRLVWTP QLHKRFVDVV AHLGVKNAVP  180
KTIMQLMNVE GLTRENVASH LQKYRLYLKR MQGLSNEGPS SSDHLFASTP VPQSLHESSG  240
GGNGNSHTPV PIPMPYPPQM VHMPYPPPQM VPHPAGAGGA AYHHGFESHS HPYNMMMQQR  300
DWSANKFASV SPYQHRMTPN DK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.22e-75G2-like family protein