PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024981903.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NF-YB | ||||||||
Protein Properties | Length: 192aa MW: 21668.2 Da PI: 8.0781 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 167.2 | 2e-52 | 34 | 130 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 v+eqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easd+c++ekrkt+ngdd++wa+ +lGf+dy+eplk yl+k re++g XP_024981903.1 34 VKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDHCRKEKRKTVNGDDVCWAMLNLGFDDYAEPLKRYLHKIREFDG 128 58********************************************************************************************9 PP NF-YB 96 ek 97 e+ XP_024981903.1 129 ER 130 87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MVHNIGSNNS GRQVLNFTYD ATTSATQEID HGVVKEQDRL LPIANVGRIM KQILPPNAKI 60 SKEAKETMQE CVSEFISFVT GEASDHCRKE KRKTVNGDDV CWAMLNLGFD DYAEPLKRYL 120 HKIREFDGER ANQNNKVGSS SSNEEIKDYL PNPHQETSSN YRSAGNQAPR KATVSTSPNL 180 FKFTVIDKRN IF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 9e-63 | NF-YB family protein |