PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024981637.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 462aa MW: 52447.8 Da PI: 7.9579

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024981637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.4	6.4e-10	283	315	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ ++++ LAk++gL+ +qV++WF N R + XP_024981637.1 283 HPYPTDTDKQILAKQTGLSRNQVSNWFINARVR 315 89*****************************88 PP
2	BELL	89.3	4.1e-29	148	213	7	72
BELL 7 kkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +k+++L+sll+eV+krYk+y++q+q+vi sFe+v gl sa+p+++l lka+S++FrcL +ai++q+ XP_024981637.1 148 RKRSRLISLLDEVYKRYKHYYQQIQAVITSFETVSGLSSAAPFANLDLKAMSKNFRCLNNAITDQL 213 799************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MAEGFEPYHI PQQSRREKLR VVTTGCVGDL LPLYDQSSFI SSSPNLLSKQ PRNITSSLMA 60 TATSNSDYAT AMIDESLDLQ SVNDPDNNHC YASILKGSKF LKPTQQLLDE ICDVGFGVDC 120 GLMTDPPSLE NLRTTTSVDH PNCGSDTRKR SRLISLLDEV YKRYKHYYQQ IQAVITSFET 180 VSGLSSAAPF ANLDLKAMSK NFRCLNNAIT DQLQFSVKPH EHQISYRREE LMWSGSSNDG 240 LYGQKAINNM GFVDHQPVWR PQRGLPKRAV TVLRAWLFDH FLHPYPTDTD KQILAKQTGL 300 SRNQVSNWFI NARVRLWKPM VEEVHTLEAR QVHKVSSHIQ EQETPPVISR DPSHRRNQDP 360 PSKRPRNDFS SENRYSDHHI MERNKEHMNF YGNLSIHGAN NGANGNRGVS LTLGLHQDNN 420 AITLSEPFRL NRERFVISGL DAENRQVGRE IMGGQFLHDF GG

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MAEGFEPYHI PQQSRREKLR VVTTGCVGDL LPLYDQSSFI SSSPNLLSKQ PRNITSSLMA  60
TATSNSDYAT AMIDESLDLQ SVNDPDNNHC YASILKGSKF LKPTQQLLDE ICDVGFGVDC  120
GLMTDPPSLE NLRTTTSVDH PNCGSDTRKR SRLISLLDEV YKRYKHYYQQ IQAVITSFET  180
VSGLSSAAPF ANLDLKAMSK NFRCLNNAIT DQLQFSVKPH EHQISYRREE LMWSGSSNDG  240
LYGQKAINNM GFVDHQPVWR PQRGLPKRAV TVLRAWLFDH FLHPYPTDTD KQILAKQTGL  300
SRNQVSNWFI NARVRLWKPM VEEVHTLEAR QVHKVSSHIQ EQETPPVISR DPSHRRNQDP  360
PSKRPRNDFS SENRYSDHHI MERNKEHMNF YGNLSIHGAN NGANGNRGVS LTLGLHQDNN  420
AITLSEPFRL NRERFVISGL DAENRQVGRE IMGGQFLHDF GG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	5e-98	TALE family protein