PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024981431.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 261aa MW: 30202 Da PI: 6.3019 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.7 | 9.6e-17 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +lv +v+++G ++W+ Ia+ g++R++k+c++rw +yl XP_024981431.1 16 KGPWTEQEDVQLVSYVNMFGDRRWDFIAKVSGLRRSGKSCRLRWVNYL 63 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.4 | 1.4e-17 | 69 | 113 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T++E+ ++++++ ++G++ W++Iar+++ gRt++++k++w+++ XP_024981431.1 69 RGKMTPQEERRILELHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTH 113 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MGKEDDMMMM TTTMRKGPWT EQEDVQLVSY VNMFGDRRWD FIAKVSGLRR SGKSCRLRWV 60 NYLHPGLKRG KMTPQEERRI LELHSKWGNR WSRIARKLPG RTDNEIKNYW RTHTRKNAQE 120 KKRVLSPSSS FSNSSSYSSI CTSNPTIDST PMTEFNQRSF YDTSGLEMVV ITKGESDSNT 180 MKSTTTSLND VSEMQDGYNS MDEIWKDIDL LEDDGITPVF GTCSEIAPSP MWDYSLNALW 240 MIDGLEETES NMFFPDNKRA I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46130.1 | 6e-75 | MYB family protein |