PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024981193.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 717aa MW: 80006.4 Da PI: 8.2068 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 58.9 | 8.9e-19 | 197 | 296 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +Lk+gD+v+F++++ e++ XP_024981193.1 197 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWLFQFRFwpNNNSRMYVLE-GVTPCIQSMQLKAGDTVTFSRME-PEGK 289 99**************************555567778***************9989999999***9.********************876.7888 PP .EEEEE- CS B3 92 lvvkvfr 98 l++++++ XP_024981193.1 290 LLMGFRK 296 8888776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 717 aa Download sequence |
MRSSSIKMLK QCGDGTGDDG QKYFLPSDND DASTSQMKQE ESLPPKGEMQ TMSPSISTFN 60 GTSESAHGTK VIKYKESTGV KDAYGSLVQT DLTIGLASSR NPVFLPSMAV EERELNKSYS 120 SFQHGPWSRH VLPKVPKSIL AQGYDGNASM NSQIRVARPP VEGRIKNQLL PRYWPRITEQ 180 ELQQISGDSN ATVVPLFEKV LSASDAGRIG RLVLPKACAE AYFPPISQPE GLPLRIQDVK 240 GKEWLFQFRF WPNNNSRMYV LEGVTPCIQS MQLKAGDTVT FSRMEPEGKL LMGFRKAPIS 300 ASMQDSRIAA IHSGVFPSEP SLSGVNTIGN LSHMSDYSGL LQSLKRNTDS HLNALSTNTN 360 SPIGDASRHA NEKLGSKSSV DSFQPDKKRS RNINSKSKRL LIESQDALEL KYTWEELQDM 420 LSPPTALKPS TITIEDHEFE EYEEPPVFGK VSIFTARLSG EQEQWAQCNN CSKWRRLPVN 480 FLLPAKWTCQ ENVWDQSRSV CLAPDELSPR ELEYLLGLAK EFQRLRRPDQ AQGVTGHNLT 540 EPSIAATTKH PRHRPGCSCI VCSQPPSGKG KHKPNCTCNV CMTVKRRFKT LMLRKQQRQS 600 EREAEIAEKN QLKLETEMET GFAELRSSGK GQLDLNIHPR RLQDNHAKNH VSMMSLLQAA 660 NQPLETYMKQ KGLTSLISEP QASSVTQPLP QDTPTVQADA QCNEEERQGL DENQNSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32010.1 | 0.0 | B3 family protein |