PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024981189.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 838aa MW: 92989.1 Da PI: 7.3904 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 58.6 | 1.1e-18 | 318 | 417 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +Lk+gD+v+F++++ e++ XP_024981189.1 318 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWLFQFRFwpNNNSRMYVLE-GVTPCIQSMQLKAGDTVTFSRME-PEGK 410 99**************************555567778***************9989999999***9.********************876.7888 PP .EEEEE- CS B3 92 lvvkvfr 98 l++++++ XP_024981189.1 411 LLMGFRK 417 8888776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 838 aa Download sequence |
MESRICMNEL CGASLAAAGD YKKGWALRSG DFAKLCNKCG IAYEKLAFCE LFHLVDTGWR 60 ECTSCGKRLH CGCIASSAFI ELLEDGGVSC ASCSNSLRRE PSTSEDKPEE CGVSVENSVG 120 EMRSSSIKML KQCGDGTGDD GQKYFLPSDN DDASTSQMKQ EESLPPKGEM QTMSPSISTF 180 NGTSESAHGT KVIKYKESTG VKDAYGSLVQ TDLTIGLASS RNPVFLPSMA VEERELNKSY 240 SSFQHGPWSR HVLPKVPKSI LAQGYDGNAS MNSQIRVARP PVEGRIKNQL LPRYWPRITE 300 QELQQISGDS NATVVPLFEK VLSASDAGRI GRLVLPKACA EAYFPPISQP EGLPLRIQDV 360 KGKEWLFQFR FWPNNNSRMY VLEGVTPCIQ SMQLKAGDTV TFSRMEPEGK LLMGFRKAPI 420 SASMQDSRIA AIHSGVFPSE PSLSGVNTIG NLSHMSDYSG LLQSLKRNTD SHLNALSTNT 480 NSPIGDASRH ANEKLGSKSS VDSFQPDKKR SRNINSKSKR LLIESQDALE LKYTWEELQD 540 MLSPPTALKP STITIEDHEF EEYEEPPVFG KVSIFTARLS GEQEQWAQCN NCSKWRRLPV 600 NFLLPAKWTC QENVWDQSRS VCLAPDELSP RELEYLLGLA KEFQRLRRPD QAQGVTGHNL 660 TEPSIAATTK HPRHRPGCSC IVCSQPPSGK GKHKPNCTCN VCMTVKRRFK TLMLRKQQRQ 720 SEREAEIAEK NQLKLETEME TGFAELRSSG KGQLDLNIHP RRLQDNHAKN HVSMMSLLQA 780 ANQPLETYMK QKGLTSLISE PQASSVTQPL PQDTPTVQAD AQCNEEERQG LDENQNSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32010.1 | 0.0 | B3 family protein |