PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024981173.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB_related | ||||||||
Protein Properties | Length: 289aa MW: 31992.9 Da PI: 7.8827 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.6 | 6.9e-14 | 40 | 84 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT eE++++++a +++ + Wk+I +g +t q++s+ qky XP_024981173.1 40 RESWTDEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 84 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MNNLNKNSTQ SPSPSMAANS TPTDSSGKKV RKPYTITKSR ESWTDEEHDK FLEALQLFDR 60 DWKKIEDFVG SKTVIQIRSH AQKYFLKVQK NGSIAHVPPP RPKRKATHPY PQKASKNVLL 120 PLQASIGYPS SLTALAPGYS PWDDTSMLIS PSGGIIPSQD EYDLHGFEAD IGSKEAGRIS 180 NISTSGIGSS SREMPSSELA NQGEQGIPDF SEVYSFIGSV FDPETKGHVQ KLKEMDPINF 240 ETVLLLMRNL TMNLSSPDFE PMRKVLSSYE FNSKNVGVSA GNVYEQSKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09600.1 | 1e-121 | MYB_related family protein |