PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_024981171.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 729aa MW: 79307.5 Da PI: 6.5198 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59.7 | 5.1e-19 | 203 | 302 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W++++++ +++s++yvl+ G + +L++gD+v+F++ + +++ XP_024981171.1 203 FEKVLSASDAGRIGRLVLPKACAEAYfpAINQSEGLPIRIQDIKGKEWTFQFRFwpNNNSRMYVLE-GVTPCIQNMQLQAGDTVIFSRLD-PGEK 295 99**************************677777888***************9989999999***9.********************654.5666 PP .EEEEE- CS B3 92 lvvkvfr 98 lv++ ++ XP_024981171.1 296 LVIGCRK 302 6666654 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 729 aa Download sequence |
MNGGASVDKG KLTQLSEAIE KHQPSPSSSS IGHQIRQDEN RLPSGELGMG FSSSKDVGTI 60 FPSSSSLFAT PDNGRPDSGL KALYEAMPQP SLSYSLANAL ATTKSSVLSN PSGVVDGREP 120 EKVPSFKQGQ RSRLTFPKPS KSGVSIRSQS NKGMVSDNRV ARPPAEGRGR NQLLPRYWPK 180 ITDQELLQIS GDLNSNCTIT PLFEKVLSAS DAGRIGRLVL PKACAEAYFP AINQSEGLPI 240 RIQDIKGKEW TFQFRFWPNN NSRMYVLEGV TPCIQNMQLQ AGDTVIFSRL DPGEKLVIGC 300 RKAAVSADTQ EAETPAVNGV TGGTSSGTGN PSTKNSEHEG MRNGDSVQRP VIQEKKKTRN 360 IGSKNKRLLM HNEDAMELKV TWEEAHELLR PSPTSKPTVS MIENCEFEEY DEPPVFGKKT 420 IFTEHASGSQ EQWGQCDSCS RWRRLPPDVL LPPKWTCSDN IWDPDRCSCS APDEISTRDL 480 ERIFKVGKDL KKRKLAEGRV VEEPSGLDAL ATAAVLGESI GEFGESSAGP TTRHPRHRPG 540 CTCIVCIQPP SGKGKHKPNC FCNVCLTVKR RFKTLMLRKK KRMSDREAEV VQKPLVALNN 600 GMMSPGGRII DQNGMEVEVG ESSSSKGGGQ LDLNCDPDKE EEMMAVDDGS GIIPLEWKNV 660 LAGLVPCAMP KRTNEIEGRP PVEGDLNPSS SETIPTHPPT DETASPMDDD DAAAAAAAKV 720 EMEKAVEDG |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 488 | 494 | KDLKKRK |
2 | 569 | 580 | KRRFKTLMLRKK |
3 | 569 | 582 | KRRFKTLMLRKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G30470.1 | 0.0 | B3 family protein |