PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024981171.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family B3
Protein Properties Length: 729aa    MW: 79307.5 Da    PI: 6.5198
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024981171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.75.1e-19203302198
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     f+kvl+ sd+++ grlvlpk +ae++   +++ e+  ++++d +g++W++++++  +++s++yvl+ G     +  +L++gD+v+F++ +  +++
  XP_024981171.1 203 FEKVLSASDAGRIGRLVLPKACAEAYfpAINQSEGLPIRIQDIKGKEWTFQFRFwpNNNSRMYVLE-GVTPCIQNMQLQAGDTVIFSRLD-PGEK 295
                     99**************************677777888***************9989999999***9.********************654.5666 PP

                     .EEEEE- CS
              B3  92 lvvkvfr 98 
                     lv++ ++
  XP_024981171.1 296 LVIGCRK 302
                     6666654 PP

Sequence ? help Back to Top
Protein Sequence    Length: 729 aa     Download sequence    
MNGGASVDKG KLTQLSEAIE KHQPSPSSSS IGHQIRQDEN RLPSGELGMG FSSSKDVGTI  60
FPSSSSLFAT PDNGRPDSGL KALYEAMPQP SLSYSLANAL ATTKSSVLSN PSGVVDGREP  120
EKVPSFKQGQ RSRLTFPKPS KSGVSIRSQS NKGMVSDNRV ARPPAEGRGR NQLLPRYWPK  180
ITDQELLQIS GDLNSNCTIT PLFEKVLSAS DAGRIGRLVL PKACAEAYFP AINQSEGLPI  240
RIQDIKGKEW TFQFRFWPNN NSRMYVLEGV TPCIQNMQLQ AGDTVIFSRL DPGEKLVIGC  300
RKAAVSADTQ EAETPAVNGV TGGTSSGTGN PSTKNSEHEG MRNGDSVQRP VIQEKKKTRN  360
IGSKNKRLLM HNEDAMELKV TWEEAHELLR PSPTSKPTVS MIENCEFEEY DEPPVFGKKT  420
IFTEHASGSQ EQWGQCDSCS RWRRLPPDVL LPPKWTCSDN IWDPDRCSCS APDEISTRDL  480
ERIFKVGKDL KKRKLAEGRV VEEPSGLDAL ATAAVLGESI GEFGESSAGP TTRHPRHRPG  540
CTCIVCIQPP SGKGKHKPNC FCNVCLTVKR RFKTLMLRKK KRMSDREAEV VQKPLVALNN  600
GMMSPGGRII DQNGMEVEVG ESSSSKGGGQ LDLNCDPDKE EEMMAVDDGS GIIPLEWKNV  660
LAGLVPCAMP KRTNEIEGRP PVEGDLNPSS SETIPTHPPT DETASPMDDD DAAAAAAAKV  720
EMEKAVEDG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1488494KDLKKRK
2569580KRRFKTLMLRKK
3569582KRRFKTLMLRKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30470.10.0B3 family protein