PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024980969.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 144aa MW: 15679.2 Da PI: 5.2996 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67.5 | 2.5e-21 | 19 | 70 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++G+r+++ +g+++AeIrdp++ng +r +lg+fgtaeeAa+a+++a+ +l+g+ XP_024980969.1 19 KFRGIRRRP-WGKFAAEIRDPTKNG--ARTWLGTFGTAEEAARAYDRAAFALRGH 70 89*******.***********9998..**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
MNANQHAGAG EEKGKRENKF RGIRRRPWGK FAAEIRDPTK NGARTWLGTF GTAEEAARAY 60 DRAAFALRGH QAILNFPNDG QYRSGATPEL GSSSSVPLTS TSTTSSWISF PVENDDGGSE 120 KEAAAAVIEF EYLDDKLLEE LLGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 7e-24 | ERF family protein |