PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024980908.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | C2H2 | ||||||||
Protein Properties | Length: 145aa MW: 15569.3 Da PI: 7.5806 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.5 | 0.0001 | 32 | 54 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H++ H XP_024980908.1 32 YECTFCKRGFTNAQALGGHMNIH 54 99*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MEPNQVVVSE SSDEAIDTVQ ERNTTQTTGR SYECTFCKRG FTNAQALGGH MNIHRKHKAK 60 LKESSFSPPP NAAATATTTT AISPFSISTQ GKNKPLSLFG GGSSDSTENA TKDDPPSPAL 120 ELDLELRLGH VESPGNKITA TRKFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53820.1 | 1e-14 | C2H2 family protein |