PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024980839.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family FAR1
Protein Properties Length: 295aa    MW: 34202.4 Da    PI: 8.8358
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024980839.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.41.7e-1669164190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 
                     ++Y++Y+  +GF++r  ++k +   ge+ ++ f  ske ++ +++ +       e++rr+ + +rtgCka+lkv+  k +g++ev+++ + HnH 
  XP_024980839.1  69 NMYRKYGDVAGFDIRLGSKKLN-ALGEVQTHYFIWSKEANPPKKEFDslevspGERKRRNXNFKRTGCKACLKVHYVKaSGRYEVYHFIEGHNHM 162
                     58***************98777.8899************9999988899**99999********************999**************** PP

            FAR1  89 la 90 
                     l+
  XP_024980839.1 163 LC 164
                     98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MSDQREGICS NEIHDKYSTV VGNEADCYDE LSQEMGESPG GTKIWVPNVD SNMCPKVGDL  60
FSSIEAVENM YRKYGDVAGF DIRLGSKKLN ALGEVQTHYF IWSKEANPPK KEFDSLEVSP  120
GERKRRNXNF KRTGCKACLK VHYVKASGRY EVYHFIEGHN HMLCHSDEKM FTRSRRKLDY  180
KERRNVYHAS SSKVGITQSR RMQLAMNGGL VASGGTTRDH MNFRRDIMLF VGDKDAQMLI  240
NKMSKRREHC SEYFFEYKCD ERELIAIFWA DKTSRMNYKH FGDTISFDAT FRTNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-20FAR1 family protein