PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024980776.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family B3
Protein Properties Length: 770aa    MW: 84731.4 Da    PI: 6.5119
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024980776.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B363.72.9e-20630728295
                     EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 
                     +kvl++sdv+++gr+vlpkk ae+h  +++++ ++ + +ed  ++++W+++++     ++ks++y+l+ ++ +FvkangL+egDf+v++  ++ +
  XP_024980776.1 630 QKVLKQSDVGSLGRIVLPKKEAESHlpDLDSRDGISIAMEDiGTSQVWNMRYSLrfwpNNKSRMYLLE-NTGDFVKANGLQEGDFIVLY--SDvK 721
                     79*************************999999********7777*******7778888888888887.********************..5559 PP

                     EE..EEE CS
              B3  89 efelvvk 95 
                     +++++++
  XP_024980776.1 722 CGKYLIR 728
                     9988776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 770 aa     Download sequence    
MYPKEEKDVD DHHRMEGYDH HVIDEQENCK STGFDALGTT MMTSTDDQRG IWEIDVRAQQ  60
QNLLHEMNDP SMFYNDQFPQ IPDFPCMSSS SSSSSNPAPA KPISSATTTS SASSASASSS  120
TSSAASWAVL KSEYVTEEED DQLEELGVDR RKRCHRSEEM PAAVMSTAVV EAVGRPLEMA  180
DGSGSIDCMD VMENFGYMDL IDGNEIWDPS SIFEQNPPEN LQQECLNNSN GSEVVQDGGG  240
VGGGGRLDEL GAVFFEWLKS NKEFISAEDM RNIKLKKSTV ECASKRLGSS KEGKKQLLKL  300
ILEWVQQHQL QRKASGGVEG PAPATAPTPT AAATTTQYPL QHFQGLPSQP PPPTTPPPFH  360
CNSWVQPNDM NHGFSPTPWI PPPLPYPPYM ADQATNGMAM VAAQPSGTFS YMGGGDYNSA  420
MNCHLNPYNN PGSGEYQVLE SAPSWNPSQI TMAAASPYNN QFPDVGNNYG PPIMPLPSAY  480
TDQYPYNPVF AGGGGGGGEQ RLMRLGSSAT KEARKKRMAR QRRTYFHHHH HSRQNQQHNH  540
PNQVANSDHH PHTMLVDDNC SGKSQGGNWL YWPSTPSATT PAATVLPPPM EAPQRPPSRI  600
PQTSDRQSKQ TSSDKRQGLK TEKNLKFLLQ KVLKQSDVGS LGRIVLPKKE AESHLPDLDS  660
RDGISIAMED IGTSQVWNMR YSLRFWPNNK SRMYLLENTG DFVKANGLQE GDFIVLYSDV  720
KCGKYLIRGV KVRQPATGKP EAKKPAKRSY RSTSQSARSS PSSPTKITAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.13e-81B3 family protein