PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_024980776.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 770aa MW: 84731.4 Da PI: 6.5119 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 63.7 | 2.9e-20 | 630 | 728 | 2 | 95 |
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 +kvl++sdv+++gr+vlpkk ae+h +++++ ++ + +ed ++++W+++++ ++ks++y+l+ ++ +FvkangL+egDf+v++ ++ + XP_024980776.1 630 QKVLKQSDVGSLGRIVLPKKEAESHlpDLDSRDGISIAMEDiGTSQVWNMRYSLrfwpNNKSRMYLLE-NTGDFVKANGLQEGDFIVLY--SDvK 721 79*************************999999********7777*******7778888888888887.********************..5559 PP EE..EEE CS B3 89 efelvvk 95 +++++++ XP_024980776.1 722 CGKYLIR 728 9988776 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 770 aa Download sequence |
MYPKEEKDVD DHHRMEGYDH HVIDEQENCK STGFDALGTT MMTSTDDQRG IWEIDVRAQQ 60 QNLLHEMNDP SMFYNDQFPQ IPDFPCMSSS SSSSSNPAPA KPISSATTTS SASSASASSS 120 TSSAASWAVL KSEYVTEEED DQLEELGVDR RKRCHRSEEM PAAVMSTAVV EAVGRPLEMA 180 DGSGSIDCMD VMENFGYMDL IDGNEIWDPS SIFEQNPPEN LQQECLNNSN GSEVVQDGGG 240 VGGGGRLDEL GAVFFEWLKS NKEFISAEDM RNIKLKKSTV ECASKRLGSS KEGKKQLLKL 300 ILEWVQQHQL QRKASGGVEG PAPATAPTPT AAATTTQYPL QHFQGLPSQP PPPTTPPPFH 360 CNSWVQPNDM NHGFSPTPWI PPPLPYPPYM ADQATNGMAM VAAQPSGTFS YMGGGDYNSA 420 MNCHLNPYNN PGSGEYQVLE SAPSWNPSQI TMAAASPYNN QFPDVGNNYG PPIMPLPSAY 480 TDQYPYNPVF AGGGGGGGEQ RLMRLGSSAT KEARKKRMAR QRRTYFHHHH HSRQNQQHNH 540 PNQVANSDHH PHTMLVDDNC SGKSQGGNWL YWPSTPSATT PAATVLPPPM EAPQRPPSRI 600 PQTSDRQSKQ TSSDKRQGLK TEKNLKFLLQ KVLKQSDVGS LGRIVLPKKE AESHLPDLDS 660 RDGISIAMED IGTSQVWNMR YSLRFWPNNK SRMYLLENTG DFVKANGLQE GDFIVLYSDV 720 KCGKYLIRGV KVRQPATGKP EAKKPAKRSY RSTSQSARSS PSSPTKITAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G24650.1 | 3e-81 | B3 family protein |