PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024980771.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 499aa    MW: 54119.6 Da    PI: 6.1407
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024980771.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.28.2e-053113313555
                     TS-STCHHHHHHHHHHHHHHH CS
             HLH  35 skKlsKaeiLekAveYIksLq 55 
                     s++ +Ka++L +A+eY+ksLq
  XP_024980771.1 311 SERSDKASMLDEAIEYLKSLQ 331
                     67889***************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    
MNHCVPDFET DDDYFFSASA NSKRHKKSAM GDEDIMELLW QNGQVVVQSQ NQRSAGNKKS  60
ETMPSTAGRE IRSGVIDEET TPSNLFMQED EMVSWLHYPS DDNSLDLYLH NNDIPYPVLP  120
SSSSAPATTL PSSLPPPPPP LVTVPPTRPP IPPLNRVDEE PSQPKFANFL HFSRSNKRGL  180
AGSGPSSSKQ MSQAITQSTV VESNIGCRGS MSSFGGAGTS SAGTGREPET CDVSASSSPG  240
TGGSGASASV EPSSHKPPPA TDDRKRKGRD TDDTECYSED LEFEYHDPKK KSRGSASSTK  300
RSRAAEVHNL SERSDKASML DEAIEYLKSL QMQVQMMSMG YNMVPMMFPG VQRYMPTMPA  360
MGMGMGMGMG MGMDHIGMNR GMVPYPSVLP GPQMPNSAAA HMGQRFPVPR FQMAQVPIMG  420
PGTGEAANPS DPMMNSFPTQ NANQPRVPFL DPYQQCLGLP QTQLAQQQQQ QQNQTGMAAV  480
TSKPSSSKDV RYPQRHPTG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1264291RKRKGRDTDDTECYSEDLEFEYHDPKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.12e-23bHLH family protein