PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024980748.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 259aa MW: 29648.1 Da PI: 7.0716 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.7 | 1.6e-19 | 31 | 80 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr++ +g+WvAeIr+p++ r+r +lg+f taeeAa a+++a+++l+g XP_024980748.1 31 EFRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDEAARRLYG 80 59****999.**********965...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MDNCRRTTAP FKPWKKGPTR GKGGPQNAAC EFRGVRQRTW GKWVAEIREP KKRTRLWLGS 60 FATAEEAAMA YDEAARRLYG PDAYLNLPHL RSNFNPLNKS HKFKWFPANK LASMFPATGL 120 LNLNAQPSVH VIHQRLQELK KTQPSSSSSS SSNNSSIFDQ INHDQVQVNS EKTHVKECIE 180 KPQIDLNEFL QQLGVLKKDD QKDKTSFDHE AVIEESGLGE EDFNWDVLSE LHGSDQDHGY 240 QIYDDHDQEL VLPTTIWNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57600.1 | 5e-68 | ERF family protein |