PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_024980446.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 230aa MW: 26342.1 Da PI: 10.0838 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 62.5 | 6.8e-20 | 130 | 219 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k +++s+v+ +l lp +f+++h +k ++ +tl de+g +W+ k+ ++ + l++GWk+F+++++L +gD +vF+l++ + f +v XP_024980446.1 130 FVKPMLQSHVSGGFWLGLPVHFCKSHL-PK-RDEIMTLVDEDGDEWQTKY--LPRKTG--LSGGWKGFAEDHKLVDGDALVFQLIKLTVF--KVY 216 89************************4.32.4568***************..555544..***********************9986777..777 PP EE- CS B3 96 vfr 98 ++r XP_024980446.1 217 IIR 219 766 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 230 aa Download sequence |
MVASKKVNYE ESRMKRLEEN KKRMEELKLT ALAQSLRTTL SPKPSPMKKV KRTPRQPLDL 60 SAVRRSNRVA DKPPASYKEV PIEPLGRRRS YGKSARDLSN RVYASHEDRE YTSGRAEELH 120 STLEADFPSF VKPMLQSHVS GGFWLGLPVH FCKSHLPKRD EIMTLVDEDG DEWQTKYLPR 180 KTGLSGGWKG FAEDHKLVDG DALVFQLIKL TVFKVYIIRV NQAEDGDESR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G19184.1 | 2e-87 | B3 family protein |