PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024980439.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 358aa    MW: 40133.3 Da    PI: 7.3812
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024980439.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH322.2e-102843241055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L++l+P+      +K++ +++Le Av+Y+k Lq
  XP_024980439.1 284 RKRRERINERLRILQSLVPNG-----TKVDISTMLEDAVQYVKFLQ 324
                     9******************97.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MKYYGYVSFK DLDSTSGNIG GNIWRTLFWR VLLFRITAPS VPTIFTSARR MESVTAMLGE  60
WNSFSGLQFT EEAYFMAQLL GSFPLPSDSP NVSPFEVPST SWPQQELTMT IDEVDETSVY  120
LSDDTRSNPH CLLTDGGSIL SRTSIDCLKD REKSILSSIP LLSDNTLMKG KERDEILVPQ  180
SGKDNKLSAS SRKRSCSMAD VHDNREKIKC RKSRKLISKG NGTEADHDAV FGQIMKIYGS  240
DDDSNWSQES STSSRPKETA NLNSNGKTKA NRGSATDPQS VYARKRRERI NERLRILQSL  300
VPNGTKVDIS TMLEDAVQYV KFLQLQIKLL SSDDLWMYAP IAYNGMEIGL ESTIPSPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-45bHLH family protein