PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024980439.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 358aa MW: 40133.3 Da PI: 7.3812 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32 | 2.2e-10 | 284 | 324 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L++l+P+ +K++ +++Le Av+Y+k Lq XP_024980439.1 284 RKRRERINERLRILQSLVPNG-----TKVDISTMLEDAVQYVKFLQ 324 9******************97.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 358 aa Download sequence |
MKYYGYVSFK DLDSTSGNIG GNIWRTLFWR VLLFRITAPS VPTIFTSARR MESVTAMLGE 60 WNSFSGLQFT EEAYFMAQLL GSFPLPSDSP NVSPFEVPST SWPQQELTMT IDEVDETSVY 120 LSDDTRSNPH CLLTDGGSIL SRTSIDCLKD REKSILSSIP LLSDNTLMKG KERDEILVPQ 180 SGKDNKLSAS SRKRSCSMAD VHDNREKIKC RKSRKLISKG NGTEADHDAV FGQIMKIYGS 240 DDDSNWSQES STSSRPKETA NLNSNGKTKA NRGSATDPQS VYARKRRERI NERLRILQSL 300 VPNGTKVDIS TMLEDAVQYV KFLQLQIKLL SSDDLWMYAP IAYNGMEIGL ESTIPSPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14760.1 | 3e-45 | bHLH family protein |