PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024980292.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 27980.2 Da PI: 10.1783 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.3 | 3.5e-27 | 10 | 58 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev +iifsstgkl+++ XP_024980292.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGLIIFSSTGKLHDFT 58 8**********************************************97 PP | |||||||
2 | K-box | 77.9 | 2.5e-26 | 84 | 170 | 12 | 98 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++a+ +q e+ +L+++++ Lq+++R+llGe+L+ L++++Lq+Le +Le slk +R+kK+++l+++++el +k + +enk+L++k+ XP_024980292.1 84 SEAKFWQGEAVQLRQQLQYLQQNHRQLLGEELSGLNVNDLQKLEIKLEMSLKGVRKKKEQVLMDEVKELNHKGSFVGQENKELHEKV 170 6789*********************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGLIIFSS TGKLHDFTSS 60 SMRNVIERYN KVREEHHRLL NPISEAKFWQ GEAVQLRQQL QYLQQNHRQL LGEELSGLNV 120 NDLQKLEIKL EMSLKGVRKK KEQVLMDEVK ELNHKGSFVG QENKELHEKV NLLRQENTKL 180 QKEVYELWSM AEATKSSTTD MHHKNYELHA PINLQLSQPQ PQKNCISVET MKLGLQLNSK 240 AS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14210.1 | 1e-82 | MIKC_MADS family protein |