PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024980252.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family DBB
Protein Properties Length: 210aa    MW: 22889.7 Da    PI: 4.6153
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024980252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box192.9e-06447542
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                     C+ +e  e++  C  ++  lC  C ++ H        H++vpl
  XP_024980252.1  4 QCNVCEVAEATVLCCADEAALCWACDEKVHAAnklaskHQRVPL 47
                    7******99*********************66899999999986 PP

2zf-B_box30.95.7e-105294137
        zf-B_box  1 seerkCpeHeekelqlfCedCqqllCedClleeHkg.......H 37
                    ++++kC+ ++e    +fC +++ llC++C +++H +       H
  XP_024980252.1 52 NQMPKCDICQETDGYFFCLEDRALLCRKCDVAIH-SlndlvssH 94
                    689********99*********************.434455555 PP

Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MKIQCNVCEV AEATVLCCAD EAALCWACDE KVHAANKLAS KHQRVPLSNS NNQMPKCDIC  60
QETDGYFFCL EDRALLCRKC DVAIHSLNDL VSSHQRFLLT GVKIGVETGD LIASSVKSSA  120
CEKIPETAES LCLPTSAPES ANSPYNEVLP TQAAGSGDCG SPKLPFGGGS SIQQWQFDEF  180
FGLNDFNQNY NHVDYGSSRW QSFLVTSTNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78600.11e-73DBB family protein