PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024979556.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB_related | ||||||||
Protein Properties | Length: 625aa MW: 69314.1 Da PI: 5.8991 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.2 | 4.5e-09 | 501 | 549 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r +Rt+ ++k++w+++l XP_024979556.1 501 PWTLSEVVKLVEGVSRYGAGRWSEIKRISFatcSHRTAVDLKDKWRNLL 549 8************************999989999*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 625 aa Download sequence |
METVVAVEES EKTRLEGTSA IVITCSDSSK QIADPVVYKL ARVEGDGRLV PATDDEVMEV 60 EDLLDDKNSV HFVLDTGQTA VCTSNEDTFA QEFMPIDCEG ILKFEDPSTQ GGRSDGLVDT 120 TVDLGKLNSQ YEEIAPSRST PVGEQIDQSG DRKQAELPLG SAESEPSTST MCASWKPDFS 180 KLKGEICLDN LSVRELHATF KATFGRETSV KDKQWLKRRI SMGLSNSCDV STTTFIIEND 240 KVKKKGKVED CNNKDEDYEE DHFAGSGGRN VSGDDISVSH TIQMDDHFSG SSKSVQSATS 300 KLHIASEDDH QGAKRVRKPT KRYIEEVSEL DCREYSGRLV SSVKSSGHGP RTRVRPIHNI 360 QPVRRPLVTR HDSLGGSGVQ IPYVSRIRRG RPRENFMALM KFQSCGMGMA ARLVKKAHDG 420 HDPQSDNEIE NQELKARPVT GWIQQPLIEE PGENQQYSEQ SADLNDDVDE GHMDSYADDS 480 DDNILTVPTA KGGMRRKHHR PWTLSEVVKL VEGVSRYGAG RWSEIKRISF ATCSHRTAVD 540 LKDKWRNLLR ASFAQLPAEK GQVGNSKKQS SSIPIPAPIL LRVRELAEMQ SQVSPDLKSV 600 KYNNNNNNSG STRNNNVNDI RSGFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72650.1 | 1e-101 | MYB_related family protein |