PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024978817.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 213aa MW: 23667.4 Da PI: 9.8314 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.8 | 9.4e-09 | 104 | 144 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++L +Av+Y+k L XP_024978817.1 104 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAVHYMKFL 144 699*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MEMMTTMMME LDKLPNPFSL PFQHLNHPTY PTPESPAIPP PQFRVSHDFP RPSWLQQKPD 60 SVEAMREMIF RMAALQPIQI DPESVKPPKR RNVKISKDPQ SVAARHRRER ISERIRILQR 120 LVPGGTKMDT ASMLDEAVHY MKFLKKQVQS LEQAAAAAAG GGGTTTGISN VAGFCSPTTA 180 MNHHHGGVNY ANVIRACGEP AADQMVGSME LLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67060.1 | 7e-39 | bHLH family protein |