PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024978660.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 363aa MW: 40848.6 Da PI: 6.4241

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024978660.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39	1.7e-12	76	124	4	56
XCHHHCHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLe.ekvkeLeaeNkaLkkeleelkkev 56 +k+ rr+++NReAAr+sR+RKka++++Le + k L e ele+ + ++ XP_024978660.1 76 DKVLRRLAQNREAARKSRLRKKAYVQQLEvSRLKLLHLEQ-----ELEQTRAQC 124 7999************************933555555444.....555555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MNSSSTQYLN SKRMDVYEPM HQFSMWGDFK GNIYQDASAT MIIEVDAKLD NQSEDTSHTT 60 IGPSNQCDQE ASKPGDKVLR RLAQNREAAR KSRLRKKAYV QQLEVSRLKL LHLEQELEQT 120 RAQCALMSGG VNVCHLGFPG GANSVTPAGI AAFKMEYERW VEEQNKKTNA LKTALHSPLP 180 DMELHILVDD TMNHYANLFT IKANAAKVDV CYLISGVWKT STERLFLWIG GFRPSELLKV 240 LVPQLDLLDQ QSHDLSNLIQ ACQQAEDSLS QGMEKLQQTL AEAVAFAHAL GGGCYEMTNA 300 MDKLEELVRL VIQADYVRKE ALQQTIRYLT TRQAAQGLIS LGEYFQRLRD LSSAWAMRLC 360 EPA

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MNSSSTQYLN SKRMDVYEPM HQFSMWGDFK GNIYQDASAT MIIEVDAKLD NQSEDTSHTT  60
IGPSNQCDQE ASKPGDKVLR RLAQNREAAR KSRLRKKAYV QQLEVSRLKL LHLEQELEQT  120
RAQCALMSGG VNVCHLGFPG GANSVTPAGI AAFKMEYERW VEEQNKKTNA LKTALHSPLP  180
DMELHILVDD TMNHYANLFT IKANAAKVDV CYLISGVWKT STERLFLWIG GFRPSELLKV  240
LVPQLDLLDQ QSHDLSNLIQ ACQQAEDSLS QGMEKLQQTL AEAVAFAHAL GGGCYEMTNA  300
MDKLEELVRL VIQADYVRKE ALQQTIRYLT TRQAAQGLIS LGEYFQRLRD LSSAWAMRLC  360
EPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65210.2	1e-120	bZIP family protein