PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024978531.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 268aa MW: 29391.9 Da PI: 6.5122 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50.8 | 3.1e-16 | 134 | 180 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn E+rRR+riN+++ L++l+P++ K +Ka++L +A+eY+k+Lq XP_024978531.1 134 VHNLSEKRRRSRINEKMKALQKLIPNS-----NKTDKASMLDEAIEYLKQLQ 180 6*************************7.....5******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MANLYDASAI CSSYSPPPEP SDDISLLLRQ ILFKSSSSSS SPSPSLIPKQ VQCEIQRQPP 60 PPHSSIPTYS SAAAANVPAN GVAHVSSSSA GTIDYDPDEY DCESEEGFEN LMEEMAAKRN 120 PPRNPSKRTR AAEVHNLSEK RRRSRINEKM KALQKLIPNS NKTDKASMLD EAIEYLKQLQ 180 LQVQMLTMRN GINLYSMSAP SGVHEQDQRT GGLNQGNPPA NMTVNQERLM NPMLSLPVPC 240 TGQNQPLVLD FSHSVNHEPT FGTQRGSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36930.1 | 3e-43 | bHLH family protein |