PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024978361.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 246aa MW: 28631.8 Da PI: 6.8819 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 58.2 | 1.5e-18 | 17 | 107 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffk +p++ +++ l +p f+ ++ ++ + + +l ++ +sWev + +k ++ +++++GW+eFv++n L gDf++F+++g s+f +v+ XP_024978361.1 17 FFKFYMPAHCSTQ--LQIPPAFV-NYFKD-YLPLKFVLVTSGKKSWEVDM--NKVDDDVYFKRGWEEFVQDNSLTFGDFLMFYYNGGSKF--FVS 103 7788877766665..9*******.56333.47889***************..********************************998888..999 PP EE-S CS B3 96 vfrk 99 vf + XP_024978361.1 104 VFGN 107 9975 PP | |||||||
2 | B3 | 47.9 | 2.4e-15 | 157 | 231 | 7 | 87 |
.-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 + + ++g++ +pk f ++ ++ ++ + + sgr+W+vk+ + +s+ry +tkGWk+Fv +n + gD++ Fk+++ XP_024978361.1 157 QRTYINKGCVHMPKVFYDRVKKF--RP--IAKLQHSGRTWDVKV--SISSERYGFTKGWKKFVTENCVAIGDICCFKMIDI 231 44555556688899988777533..33..444556*********..*******************************8763 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MEEHQIGGSN CEQLPQFFKF YMPAHCSTQL QIPPAFVNYF KDYLPLKFVL VTSGKKSWEV 60 DMNKVDDDVY FKRGWEEFVQ DNSLTFGDFL MFYYNGGSKF FVSVFGNNNC LKEIEVLNNQ 120 SEQQPTCIQL GDEANRTGET KIISVEDTDL SFEVTLQRTY INKGCVHMPK VFYDRVKKFR 180 PIAKLQHSGR TWDVKVSISS ERYGFTKGWK KFVTENCVAI GDICCFKMID IKPKFYLLDV 240 SFSREI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 1e-22 | B3 family protein |