PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024978218.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 211aa MW: 23663.8 Da PI: 9.2554 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.2 | 0.00016 | 29 | 67 | 2 | 44 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiL 44 + + erE+ Rd++N+ f eL + l +++ ++s+ K++ L XP_024978218.1 29 KIHKAEREKLKRDHMNELFLELTKALEPST-QNSG---KSSAL 67 667889********************9962.3333...33344 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MDENVNVAKK KSVGRSSFSK KDGTKVPRKI HKAEREKLKR DHMNELFLEL TKALEPSTQN 60 SGKSSALTDT IRILRDLIAQ VDSLKKENAV LLEESRYVAV EKNELKEENS AIEAQIKKLQ 120 SQIADRVHYP SSYLECNPIA LQPELQSSIQ AAAPGPVVGP VYVVPLQNDP KLYQEMVTKQ 180 HGTNVSKPHA RYPSASDSWS FNILSEQQRA D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.2 | 1e-40 | bHLH family protein |