PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024978218.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 211aa    MW: 23663.8 Da    PI: 9.2554
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024978218.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.20.000162967244
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiL 44
                    +  + erE+  Rd++N+ f eL + l +++ ++s+   K++ L
  XP_024978218.1 29 KIHKAEREKLKRDHMNELFLELTKALEPST-QNSG---KSSAL 67
                    667889********************9962.3333...33344 PP

Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MDENVNVAKK KSVGRSSFSK KDGTKVPRKI HKAEREKLKR DHMNELFLEL TKALEPSTQN  60
SGKSSALTDT IRILRDLIAQ VDSLKKENAV LLEESRYVAV EKNELKEENS AIEAQIKKLQ  120
SQIADRVHYP SSYLECNPIA LQPELQSSIQ AAAPGPVVGP VYVVPLQNDP KLYQEMVTKQ  180
HGTNVSKPHA RYPSASDSWS FNILSEQQRA D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.21e-40bHLH family protein