PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024977994.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 370aa    MW: 41002.7 Da    PI: 4.4982
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024977994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-194898155
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  XP_024977994.1 48 KKFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 98
                    589*******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MESFSIFWKR KVATDQNSDH LEGNICWDGS ASETVVTAVH GGPRKARKKF VGVRQRPSGR  60
WVAEIKDTIQ KIRVWLGTFD TAEEAARAYD EAACLLRGAN TRTNFWPSSQ PFSTAPALPS  120
KITNLLIRRL EARNNSLAAT TSSQNPSLLT ANMKQPEEFQ DGTAEFSDTH FMDDFLNDLD  180
EYLPANDSMI FTDSGTSSSE ADMAVHVDRC DYHPTDSSST GDTIGGEVED EEGMDFKFVD  240
ELGSACSFSP FEIAQEIALE SGEEEEPLTI SEAMKRMKYE RKFSASLYAF HGIPECLKLK  300
LGPRGGLKAR ELSKTQGTDR PVKQGKKDTE ECVVVEYVAT EMATISSSND VIYGELSLWS  360
SLDLPTICYV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-23ERF family protein