PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024977910.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB_related | ||||||||
Protein Properties | Length: 178aa MW: 20337.9 Da PI: 9.2278 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53 | 8.1e-17 | 8 | 50 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++W++eEd l+ +k+ G++ W+ Iar+m+ gR+++ +k++w+ XP_024977910.1 8 KDAWSEEEDRVLIAIHKEVGNK-WSEIARRMP-GRSENTIKNHWN 50 689*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MLTKYLQKDA WSEEEDRVLI AIHKEVGNKW SEIARRMPGR SENTIKNHWN ATKRRQLSSR 60 KRGKPKYQSL LQEYIRSVSS SSSSSVNQIN IKENNVKKTQ MVSAPITSLQ TNFSYADVNG 120 SSSSSLEDYS LGAMMGYIPG GSMLHESSLE FDLGPFHLSS QLEFDLKKEM DFLEMLYQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 7e-30 | MYB family protein |