PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024977721.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | HSF | ||||||||
Protein Properties | Length: 284aa MW: 31504.9 Da PI: 5.2807 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 112 | 4.2e-35 | 10 | 101 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++++++isw++ gn+f+v+++ +fa+++Lp+ Fkh+nf+SFvRQLn+YgF+k+ ++ weF++++Fk+g++ ll + XP_024977721.1 10 FLTKTYQLVDDPATDDVISWNDGGNTFIVWKTADFARDLLPNSFKHNNFSSFVRQLNTYGFRKTVPDK---------WEFANDNFKRGERALLIE 95 9***************************************************************9999.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k+ XP_024977721.1 96 IRRRKT 101 ***986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MSHRSVPAPF LTKTYQLVDD PATDDVISWN DGGNTFIVWK TADFARDLLP NSFKHNNFSS 60 FVRQLNTYGF RKTVPDKWEF ANDNFKRGER ALLIEIRRRK TVTSSQAHAN GKPTSGDGGP 120 ASSPTSSGDD LGSSSTSSPD SKNPGSVDTP TVEKLENLSD ENEKLKKDKQ MLTSELAQMK 180 KQCNDLVAFL TQNVKVAPDQ INRILGGDGG VGEIVMADEE DDNDEEEKGE CFKLFGVFLK 240 EDKKKRGRNE NNISFGAQRK EMKMDDASRM NPYSTTGQST NVCN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 243 | 263 | KKKRGRNENNISFGAQRKEMK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36990.1 | 1e-75 | HSF family protein |