PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024977645.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 556aa MW: 64254.1 Da PI: 8.3618 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 61.8 | 2e-19 | 96 | 191 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 k++++YA ++ F+vr++++kk+ ++g i +r+fvCs+eg++++++ + e++ r+++ +++gC+a++k++++k ++ +e++++++ HnH+ XP_024977645.1 96 KMFRAYADNARFNVRIHAKKKN-KHGDIQTRWFVCSREGNPNKKHFEsmeiqpGERRYRNTNLKHCGCNACIKIHLTKdEACYEIYEFVEAHNHT 189 589**************99998.6666****************999999999888889999****************98999************9 PP FAR1 89 la 90 l XP_024977645.1 190 LL 191 96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 556 aa Download sequence |
MHKHSVKQID NNENEKVKSV YDYIRNSSSE SEENEESVYI GAVPTVGFDN LAPSQHEIDY 60 DIGESSEGSK YFIPIVDDAL KPKTNAQYAS INEAEKMFRA YADNARFNVR IHAKKKNKHG 120 DIQTRWFVCS REGNPNKKHF ESMEIQPGER RYRNTNLKHC GCNACIKIHL TKDEACYEIY 180 EFVEAHNHTL LNINDRRFSR KNTQMKYTDF KTVLNNSSYK VGARRVHRIQ TTLNEGFEHT 240 RVSEIDFKNF KRDAAACVGN KDAKMLINKL SNKRDIVPGN FFEYKCNEQE LIAIFWADEV 300 ARINYKEFDD VISFDGTFYT NKHAMIFVPF LAVDNYKASV VVGSALISGE MIENFTWVLN 360 VFLKCHEKQP IFVITDQYSA MKQAIPMVFT KAKHRLCMWH IMKKVPSKVS VALNQDPMFN 420 KVINKLVCRN NSTNTVECEC NLFTRNGYLC RHAFKIQSAR VRYGEVDAEK DKCVIDVYSK 480 VDDIINNARN DKSILARLER NLDKFMVDIE KEVPYEGPSQ QKLDAIRDHL GVSIPDEVDI 540 LPPFGKRNKG CVVRGW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 8e-37 | FAR1 family protein |