PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024977645.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family FAR1
Protein Properties Length: 556aa    MW: 64254.1 Da    PI: 8.3618
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024977645.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR161.82e-1996191190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 
                     k++++YA ++ F+vr++++kk+ ++g i +r+fvCs+eg++++++ +       e++ r+++ +++gC+a++k++++k ++ +e++++++ HnH+
  XP_024977645.1  96 KMFRAYADNARFNVRIHAKKKN-KHGDIQTRWFVCSREGNPNKKHFEsmeiqpGERRYRNTNLKHCGCNACIKIHLTKdEACYEIYEFVEAHNHT 189
                     589**************99998.6666****************999999999888889999****************98999************9 PP

            FAR1  89 la 90 
                     l 
  XP_024977645.1 190 LL 191
                     96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 556 aa     Download sequence    
MHKHSVKQID NNENEKVKSV YDYIRNSSSE SEENEESVYI GAVPTVGFDN LAPSQHEIDY  60
DIGESSEGSK YFIPIVDDAL KPKTNAQYAS INEAEKMFRA YADNARFNVR IHAKKKNKHG  120
DIQTRWFVCS REGNPNKKHF ESMEIQPGER RYRNTNLKHC GCNACIKIHL TKDEACYEIY  180
EFVEAHNHTL LNINDRRFSR KNTQMKYTDF KTVLNNSSYK VGARRVHRIQ TTLNEGFEHT  240
RVSEIDFKNF KRDAAACVGN KDAKMLINKL SNKRDIVPGN FFEYKCNEQE LIAIFWADEV  300
ARINYKEFDD VISFDGTFYT NKHAMIFVPF LAVDNYKASV VVGSALISGE MIENFTWVLN  360
VFLKCHEKQP IFVITDQYSA MKQAIPMVFT KAKHRLCMWH IMKKVPSKVS VALNQDPMFN  420
KVINKLVCRN NSTNTVECEC NLFTRNGYLC RHAFKIQSAR VRYGEVDAEK DKCVIDVYSK  480
VDDIINNARN DKSILARLER NLDKFMVDIE KEVPYEGPSQ QKLDAIRDHL GVSIPDEVDI  540
LPPFGKRNKG CVVRGW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-37FAR1 family protein