PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024977334.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 421aa MW: 47269.1 Da PI: 6.3573

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024977334.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.5	1.2e-09	361	398	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gL+++qV++WF N R + XP_024977334.1 361 FEHflHPYPNDNEKLMLASQTGLSKNQVSNWFINARVR 398 554459******************************88 PP
2	BELL	94.1	1.3e-30	222	293	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qelq+ akL+slleeV+++Y+qy++ql+ v+ssFe aglgs k+Yt+lAl+a+S hF Lkdai +qi XP_024977334.1 222 EKQELQATLAKLISLLEEVERKYEQYYQQLEDVVSSFELNAGLGSGKSYTALALNAMSGHFSGLKDAILSQI 293 689*******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MVSPDSSSNP NSIHQFLISN PIPSQTHYES QPFDVYGVDL RSLGSYPHQS LNVLPTIQSL 60 GERMSRSIDL IQAPPMADNE QDLNQHHQNQ KLSLSLGSGL LFPSSTQYRG GRWNLISEEE 120 LREKTRKTFN PSDYCSSSSS SSLHQSSSTF YGTESISISI GSSRYLKPTQ SLLEEIVSIG 180 GKDLDSSNKS YAQKLSSSGW QGSLGLCSEL KAELCSNGLS MEKQELQATL AKLISLLEEV 240 ERKYEQYYQQ LEDVVSSFEL NAGLGSGKSY TALALNAMSG HFSGLKDAIL SQIYVTRKKI 300 LQDLPKINTG FSQLSLFDKE TNRHNRIALQ QLGMIASPRQ TWRPIRGLPE TSVMILRSWL 360 FEHFLHPYPN DNEKLMLASQ TGLSKNQVSN WFINARVRLW KPMIEEMYKE EFADSSEDSN 420 L

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MVSPDSSSNP NSIHQFLISN PIPSQTHYES QPFDVYGVDL RSLGSYPHQS LNVLPTIQSL  60
GERMSRSIDL IQAPPMADNE QDLNQHHQNQ KLSLSLGSGL LFPSSTQYRG GRWNLISEEE  120
LREKTRKTFN PSDYCSSSSS SSLHQSSSTF YGTESISISI GSSRYLKPTQ SLLEEIVSIG  180
GKDLDSSNKS YAQKLSSSGW QGSLGLCSEL KAELCSNGLS MEKQELQATL AKLISLLEEV  240
ERKYEQYYQQ LEDVVSSFEL NAGLGSGKSY TALALNAMSG HFSGLKDAIL SQIYVTRKKI  300
LQDLPKINTG FSQLSLFDKE TNRHNRIALQ QLGMIASPRQ TWRPIRGLPE TSVMILRSWL  360
FEHFLHPYPN DNEKLMLASQ TGLSKNQVSN WFINARVRLW KPMIEEMYKE EFADSSEDSN  420
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	2e-95	TALE family protein