PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024977327.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 221aa MW: 24712.3 Da PI: 8.0999 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13 | 0.0002 | 22 | 70 | 1 | 53 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 +r + erE+ R+++N+ f eL l + Ka+iL ++++ +k+ XP_024977327.1 22 KRIHKAEREKMKREHLNELFLELAGALELT----EQNSGKASILGETTRVVKD 70 688899*********************996....4556677888888887776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MGAEKSPTCL HPSKKNPGKV PKRIHKAERE KMKREHLNEL FLELAGALEL TEQNSGKASI 60 LGETTRVVKD MLDQIKSLKK ENAALLSESQ YVTVERNELQ DETCALQKQI SELKSVIKER 120 TVQKNLDLNA PAMESQEPQL PQYLPHDIIR LPPGNPLLNS VVVIPACHNV QIHTRPDSGL 180 IIGNKPVSNV SKPYPRYPTP SDSWPFQLLE KAGEDPHREG A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.2 | 6e-40 | bHLH family protein |