PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024977086.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ZF-HD
Protein Properties Length: 281aa    MW: 30797.6 Da    PI: 8.4013
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024977086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.74.9e-3265117457
     ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 
                      rY+eClkNhAa++Gg+ +DGCgEfmps g++gt +alkCaAC+CHRnFHR+e 
  XP_024977086.1  65 PRYRECLKNHAANMGGNITDGCGEFMPS-GDDGTLEALKCAACNCHRNFHRKEY 117
                     69*************************9.999********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MALSGSEKEI GMQTSSPYNN NHLIRESSSE TVDHGLDPDR FPGTGASVTP ISVGSKLLKS  60
PVQMPRYREC LKNHAANMGG NITDGCGEFM PSGDDGTLEA LKCAACNCHR NFHRKEYPTT  120
SPSAAGPFLQ LPPPLPSPSP SPSFHHHHHH HRTPPPTISL HHHPNWASSI NAPPVKMAFG  180
GSGGAATESS SEELNFTTAG VAPLYGMTKK RFRTKFTQDQ KDKMLEFAEK VGWRIPREDD  240
PEVQRFCAEV GVKRQVLKVW MHNNKATSGK KQVQDSNESI N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.15e-51ZF-HD family protein