PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024976993.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family B3
Protein Properties Length: 266aa    MW: 30753.2 Da    PI: 7.2834
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024976993.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.79.3e-18154255199
                     EEEE-..-HHHHT.T-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlks.grlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f+k lt sd+  + gr+v+pkk+ae++  +  ++++++l + d++g++We+ ++y+ + g+  yvl+ G +e   + +L++gD+v F++++  e+
  XP_024976993.1 154 FEKMLTASDSDLKfGRIVIPKKYAETFfpEVFEPKGIMLNVLDLEGKEWEFSFRYWPNCGSrtYVLE-GLREIMVSRKLQAGDTVSFYRME-PEG 246
                     889999999887779*********999*955567999******************888888868888.********************876.888 PP

                     ..EEEEE-S CS
              B3  91 elvvkvfrk 99 
                     ++v++++++
  XP_024976993.1 247 KMVIGFRKT 255
                     899998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MASSSSKGYC FQCQDSTSIF FRDGWRLRNG ECAQLCNRCA YVYEEGRFCE TFHSNDDGWR  60
DCESCGKLVH CGCVVSFNQY FLLDFGGVIC RECSKKNLIL ARNRRYAHEF QTDPTDVPDL  120
AKRVQIEPHY WHDGIDLEIQ CIPRTAKSIL NLLFEKMLTA SDSDLKFGRI VIPKKYAETF  180
FPEVFEPKGI MLNVLDLEGK EWEFSFRYWP NCGSRTYVLE GLREIMVSRK LQAGDTVSFY  240
RMEPEGKMVI GFRKTSVPKP PHQAST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.14e-37B3 family protein