PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024976856.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 141aa MW: 16284 Da PI: 10.9027 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.1 | 2.1e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKA+EL +LCdaev v+ifsstgkl+e+s+ XP_024976856.1 10 RIDNSTSRQVTFSKRRSGLLKKAKELAILCDAEVGVMIFSSTGKLHEFSN 59 8***********************************************95 PP | |||||||
2 | K-box | 66 | 1.4e-22 | 80 | 140 | 9 | 69 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 ++ +q+e+a Lk++++nLq+++R+++Ge+L+ Ls+k+Lq++e+qLe sl+ iR kK XP_024976856.1 80 SPISEVRFWQREAAMLKQQLKNLQENHRRMMGEELSGLSVKDLQSMENQLEMSLRGIRMKK 140 45677899****************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KAKELAILCD AEVGVMIFSS TGKLHEFSNT 60 SMKSVIDRYH KAKEEQQLTS PISEVRFWQR EAAMLKQQLK NLQENHRRMM GEELSGLSVK 120 DLQSMENQLE MSLRGIRMKK V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 1e-77 | MIKC_MADS family protein |