PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024976807.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 236aa MW: 26655.8 Da PI: 9.0238 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 100.8 | 1.9e-31 | 14 | 148 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 lppG++F P++eelv++yL+ k +g++l + i+e+d+y++eP dLp ++++k+wy F+ + ++ +k+r + g+Wk +g+ XP_024976807.1 14 LPPGCQFFPSEEELVCHYLALKNSGDHLGS-NLIEEIDLYRFEPFDLPGracflfGREGKRKHWYCFAAMPRVKRGRGEKRR-AGGGIWKRSGSV 106 79*************************999.89***************44777764445778*******9998765555555.689********* PP NAM 90 kevlsk..kgelvglkktLvfykgrapk.gektdWvmheyrl 128 k+++ + +g + g++kt+vfy g++pk +++t+W+m ey+l XP_024976807.1 107 KDIVGAgvQGVVLGTRKTFVFYLGDSPKtAVRTKWIMYEYAL 148 ****98778888**********997766167*********87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MDDSMNPNPA FLPLPPGCQF FPSEEELVCH YLALKNSGDH LGSNLIEEID LYRFEPFDLP 60 GRACFLFGRE GKRKHWYCFA AMPRVKRGRG EKRRAGGGIW KRSGSVKDIV GAGVQGVVLG 120 TRKTFVFYLG DSPKTAVRTK WIMYEYALVD QKMAEASYVL CRVFAKSHHR SNTPSDVLKS 180 CGENVKTVRH IGIQCDDALI SESGMVKFMG NQKSLSDFLV YWNADFLLMN LWKIVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 1e-28 | NAC family protein |