PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024976353.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 318aa MW: 36539.6 Da PI: 5.8215

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024976353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.5e-09	261	295	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 + +yp+++++ LA+++gL+++q+ +WF N+R ++ XP_024976353.1 261 RWPYPTEADKVALAESTGLDQKQINNWFINQRKRH 295 569*****************************885 PP
2	ELK	33.1	1.3e-11	216	236	2	22
ELK 2 LKhqLlrKYsgyLgsLkqEFs 22 LK+ LlrKYs y++sLk+EFs XP_024976353.1 216 LKDTLLRKYSKYISSLKHEFS 236 9*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MEEMYGLMNY HEQVPPPDSA RENYGHHAFD DQSPEVGHHR RIRPVFGSGS NIQTSSSNNN 60 NNGLAEELDE DLSSENRAKI MSHPLYPKLL QAYIACQKVG APPDISNLFD EIFRDNDFCR 120 RSSACSCLGD DPELDEFMET YCEMLGKYRS DLARPFDEAT TFLNNMQTQL TNLCKGTSIT 180 YHTGGDESVE RSKEDTSRGG EAEGVRSNWS NEDRALKDTL LRKYSKYISS LKHEFSNKKK 240 KGKLPKEARQ VLLDWWNLHY RWPYPTEADK VALAESTGLD QKQINNWFIN QRKRHWKPSE 300 NMQFAVMDSL CGSFIVNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-101	TALE family protein