PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024976136.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 273aa    MW: 29712.2 Da    PI: 9.4306
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024976136.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.1e-11156203455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_024976136.1 156 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 203
                     8*************************9....677*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MDPPIINETS FSAANPSSYS LTGIWTFSSF NGGRNESLGL KMGSLISRLG EPNNNRDEES  60
TVTEHSGGAR KRRDANSEDE SSKLVSTSSG NDLIKLNGKR MKMSGSKEEL GGFSKMDREG  120
SSGSASKGGV GQTHKPSEPP KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP  180
GCNKVIGKAL VLDEIINYIQ SLQHQVEFLS MKLEAVNTRM NSPVEGFPTK DLGPPPLDAA  240
GFLFGSQTAR QFGPGSQPEW LHMQLGNSFG RTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.13e-85bHLH family protein