PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024975802.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 270aa    MW: 30765.3 Da    PI: 7.7279
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024975802.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.83.5e-1281134155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ +hn+ Er RR+r+N+ ++ L +llP + + ++kK+s   i+ +A +YI +Lq
  XP_024975802.1  81 KKLNHNASERDRRKRVNELYAFLCSLLPIS-SDQKKKVSIPGIVSHALKYIPKLQ 134
                     6789*************************6.488888***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MLVLSPPLFS TTYRWPLEDF VTQNLQQDCH DISLSVEENA YPSLINIPTF DHTQHDFAPS  60
SSISYGGAVN GDIGNPIKVA KKLNHNASER DRRKRVNELY AFLCSLLPIS SDQKKKVSIP  120
GIVSHALKYI PKLQKEVKTL MHKKEKLLSY SSPKHLDIRN HSAKEAMIQT VPSVVSSVSV  180
LDEKETVIQL ISSTGHMNKN KEIDFLSKAL EYLEEVYGLV LLNATTFEWY GDKKFLNTLH  240
LQMQGDQKIE AEKLKEKLCS FYQQYHELSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-29bHLH family protein