PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975699.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 195aa MW: 21860.3 Da PI: 10.0237 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.6 | 1e-08 | 114 | 154 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++Le+Av Y+k L XP_024975699.1 114 ARHRRERISERIRILQRLVPGG-----TKMDTASMLEEAVLYMKFL 154 699*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MMTVMMEFDN LPDPFSIPFQ NLSSSSSMEF SGGSSTTNHP TPSPLQPSFY HHPVPPPPPP 60 PFKTLYKPDS MEAMREMIYQ MAALQPAVQI DPESVKPPKR RNVKISKDPQ SVAARHRRER 120 ISERIRILQR LVPGGTKMDT ASMLEEAVLY MKFLKKQVQA LKQAATTGGG MAAPVKMEGN 180 VDGLLLHHRY DQSSW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50330.1 | 1e-36 | bHLH family protein |