PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975695.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 220aa MW: 25119.4 Da PI: 8.1301 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 84.9 | 1.3e-26 | 58 | 147 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 kfY+eYA+++GF++r+++ ++s+ +++i++r++ C+keg+ ++ k++ + r++++++r gC+a++ v+ +k gkw+vt++e+eH+H+l+ XP_024975695.1 58 KFYDEYARHLGFKMRIDQCRRSEVDKKIISRRLSCNKEGYYTKAKNQFGQIRKQHTSSRQGCNAMMLVRVNKFGKWVVTRFEKEHTHPLV 147 6***************************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MIGTRIGDSS QDTAELVDVN LAAGSVGDGV GSDVGCEQRA VAEPRVGMEF DSEDAAKKFY 60 DEYARHLGFK MRIDQCRRSE VDKKIISRRL SCNKEGYYTK AKNQFGQIRK QHTSSRQGCN 120 AMMLVRVNKF GKWVVTRFEK EHTHPLVLSA CLSINEGDCK ERRIEALTTE LKHQDQLINF 180 YREHLSTFLK DLEQQTEVLS TKIQVAVNNV REIETKDQKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 1e-56 | FAR1 family protein |