PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975648.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 848aa MW: 93731.6 Da PI: 6.1122 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 58.4 | 1.3e-18 | 315 | 415 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_024975648.1 315 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWLFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRME-PEGK 407 99**************************555567778***************9989999999***9.********************876.8888 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+++++++ XP_024975648.1 408 LLMGFRKA 415 88888765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 848 aa Download sequence |
MEPEVCMNGL CGALLAAEGD YKKGWALRSG GFANLCDKCG SAYEQLAFCE VFHLDDTGWR 60 ECTSCGRRLH CGCIASSAFL ELLDNGGVSC ISCSSTLGHN PKTREEKTKE TGISVENSVG 120 ETRSSSIDNH VNVGNLNKIM LTKLNDGEEL LIPSENAVAS TSQMKLEEYG TTPMSLNGTS 180 ESPHAAGIIK YRESTGLKDV YGSLVQTNLT IGLSAAPGKP VLCPSTAVEE TELNKTFSSF 240 QQGTWSRHLL PKVPKSILPQ GFNANPGMSS QIRVARPPVE GRVKNQLLPR YWPRITEQEL 300 QQISGDSNAT IVPLFEKVLS ASDAGRIGRL VLPKACAEAY FPPISQPEGL PLRIQDVKGK 360 EWLFQFRFWP NNNSRMYVLE GVTPCIQSMQ LQAGDTVTFS RMEPEGKLLM GFRKASTSTS 420 LQLMKGSTYS HLSEFSRNVN LPNGDVGWHT NEQLGSKLMA GSFPPSEKKR SRNIGSKSKR 480 LLIESQDALE IKHTWEESQD MLFPSPLQKP SVVTIEDNEF EEYEEPPVFG KGSIFTVCSS 540 GEQEQWTECD NCSKWRRLPA YFLLPPRWTC QDNVWDQSRA ACLAPDELGP RELENLLRMA 600 KDFHRRKSSV SHKPEQNQGY SGIDAQTPST AEPSAAITTK HPRHRPGCSC IVCIQPPSGK 660 GKHNPTCTCN VCMTVKRRFK TLMLRKKKRQ SEHEAKIAEK NQLTCGPPKE DVEVSISVTP 720 HNQLCYTLGH KEVEVGFLDN ESSLLGSEST SKGHLDLNIH PHREERDRAN GETRVSMMSL 780 LQVANLPLET YLKQNGLTSL ISEQQASSGS QTLPQETGET GGGDEEEDDR LGDGDELQEP 840 DDIQETRS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 676 | 687 | KRRFKTLMLRKK |
2 | 676 | 689 | KRRFKTLMLRKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32010.1 | 0.0 | B3 family protein |