PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024975648.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family B3
Protein Properties Length: 848aa    MW: 93731.6 Da    PI: 6.1122
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024975648.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.41.3e-18315415199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     f+kvl+ sd+++ grlvlpk +ae++   ++++e+  l+++d +g++W +++++  +++s++yvl+ G     ++ +L++gD+v+F++++  e++
  XP_024975648.1 315 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWLFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRME-PEGK 407
                     99**************************555567778***************9989999999***9.********************876.8888 PP

                     .EEEEE-S CS
              B3  92 lvvkvfrk 99 
                     l+++++++
  XP_024975648.1 408 LLMGFRKA 415
                     88888765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 848 aa     Download sequence    
MEPEVCMNGL CGALLAAEGD YKKGWALRSG GFANLCDKCG SAYEQLAFCE VFHLDDTGWR  60
ECTSCGRRLH CGCIASSAFL ELLDNGGVSC ISCSSTLGHN PKTREEKTKE TGISVENSVG  120
ETRSSSIDNH VNVGNLNKIM LTKLNDGEEL LIPSENAVAS TSQMKLEEYG TTPMSLNGTS  180
ESPHAAGIIK YRESTGLKDV YGSLVQTNLT IGLSAAPGKP VLCPSTAVEE TELNKTFSSF  240
QQGTWSRHLL PKVPKSILPQ GFNANPGMSS QIRVARPPVE GRVKNQLLPR YWPRITEQEL  300
QQISGDSNAT IVPLFEKVLS ASDAGRIGRL VLPKACAEAY FPPISQPEGL PLRIQDVKGK  360
EWLFQFRFWP NNNSRMYVLE GVTPCIQSMQ LQAGDTVTFS RMEPEGKLLM GFRKASTSTS  420
LQLMKGSTYS HLSEFSRNVN LPNGDVGWHT NEQLGSKLMA GSFPPSEKKR SRNIGSKSKR  480
LLIESQDALE IKHTWEESQD MLFPSPLQKP SVVTIEDNEF EEYEEPPVFG KGSIFTVCSS  540
GEQEQWTECD NCSKWRRLPA YFLLPPRWTC QDNVWDQSRA ACLAPDELGP RELENLLRMA  600
KDFHRRKSSV SHKPEQNQGY SGIDAQTPST AEPSAAITTK HPRHRPGCSC IVCIQPPSGK  660
GKHNPTCTCN VCMTVKRRFK TLMLRKKKRQ SEHEAKIAEK NQLTCGPPKE DVEVSISVTP  720
HNQLCYTLGH KEVEVGFLDN ESSLLGSEST SKGHLDLNIH PHREERDRAN GETRVSMMSL  780
LQVANLPLET YLKQNGLTSL ISEQQASSGS QTLPQETGET GGGDEEEDDR LGDGDELQEP  840
DDIQETRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1676687KRRFKTLMLRKK
2676689KRRFKTLMLRKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.10.0B3 family protein