PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975588.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 254aa MW: 28538.5 Da PI: 7.684 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.1 | 6.4e-13 | 75 | 127 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + hn+ Er RR+++N+ ++ Lr+llP + + ++kK+s ++ +A +YI +Lq XP_024975588.1 75 KLDHNASERDRRKKVNDLYAFLRSLLPVS-SDHKKKVSIPGTVSRALKYIPELQ 127 678*************************6.367777***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MLALSPPVFS TTYGWPLEDL ITPNLHQQDC NEANSYYNSL THFPTYDQMK NDFPPESVSL 60 NNGGAGDHAM MVVKKLDHNA SERDRRKKVN DLYAFLRSLL PVSSDHKKKV SIPGTVSRAL 120 KYIPELQKEV ETLKSKKKRL SSSSSTDKTS KDYHVIKSSK DAMVVSSVNA LSDKEAVIQL 180 ISSADHMSKN KEIGFLSKVL EYLEQEEDGI VLLNATTFKC SGEGMLLNTL HVQVQGDYRI 240 EAEKLKEKLC VFHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 6e-36 | bHLH family protein |