PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024975459.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 465aa    MW: 51088.3 Da    PI: 7.5034
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024975459.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.7e-09334381455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L+ l+P++    +k   Ka +L + ++Y++sLq
  XP_024975459.1 334 SHSLAERVRREKISERMKLLQNLVPNC----NKVTGKAPMLDEIINYVQSLQ 381
                     8*************************9....677*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    
MDRDFFLNAG LQFPASQPAW KLMTLMPEMN FPVDQSSADG VCGPNWEKPD QYSHFESALN  60
SMVSSPVSGS TVSTDIMAVR ELIGKLGSIR SGCGSLSQAA MTAAVPPSSS PLNSSPPPKL  120
NLPIMDHFVK ESIPIIGNSM PLNQNLPLIA ADPGFAERAA KFSCFGSRSF NGRTNELGLN  180
RNNPEFQLGS SVSPMTGNLK FPRVSSSPAL RIDRSPVGFE DCKKNSEESN MKSMCLDKKF  240
SRFSSSAANS NEESSVSEQI PSGEFGFKNQ KDSNSRKRKG GSTKKEEDAI GDSNAKRSKK  300
PLENGGKTEE NTKAIEAPKD YIHVRARRGQ ATDSHSLAER VRREKISERM KLLQNLVPNC  360
NKVTGKAPML DEIINYVQSL QKQVEFLSMK LATVNPSLDF DTININQSNN NHSHQIQSTF  420
YNQNPQTIFN GSVHEFTEPF PQFPGFGQDD LQSIVQMGFG ENVDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.16e-72bHLH family protein