PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975338.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 253aa MW: 29207.1 Da PI: 7.6344 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.5e-16 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed ll++++k++G g W++++ + g++R++++c++rw++yl XP_024975338.1 13 KGAWTAQEDMLLKNCIKKYGEGKWHLVPLKAGLRRCRNSCRLRWLNYL 60 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 44.1 | 4.9e-14 | 66 | 111 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l ++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_024975338.1 66 RGGFEEDEVDLMLRLHKLLGNR-WSLIAGRIP-GRTANDVKNYWNTHL 111 677899****************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MKHVSNTSLE LKKGAWTAQE DMLLKNCIKK YGEGKWHLVP LKAGLRRCRN SCRLRWLNYL 60 RPNIKRGGFE EDEVDLMLRL HKLLGNRWSL IAGRIPGRTA NDVKNYWNTH LRSRAKQQKK 120 EPQDAKSSED HMMVTVIKPQ PHTLSKPLSW FKGDNKNAET HDDGNIIRLS NDGVGNKYNM 180 SSELISSPVV LDDTINEFLK ELFDEEEKAI DSEIGWSFDG SQIEKKALNV TEDNENSLFD 240 FSSDEFMWNL LNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 9e-59 | MYB family protein |