PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975298.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 267aa MW: 30804.7 Da PI: 7.1145 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.9 | 3.2e-15 | 24 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed ll ++++++G g W++++ g++R++k+c++rw++yl XP_024975298.1 24 KGAWTAGEDTLLRNYIEKYGEGKWHLVSMNSGLRRCRKSCRLRWLNYL 71 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.8 | 1.4e-14 | 77 | 122 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+++++k+lG++ W++Ia +++ gRt +++k++w+++l XP_024975298.1 77 RGDFEEDEVDLILRLHKLLGNR-WSLIAGRIP-GRTSNDVKNYWNTHL 122 78999*****************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MKNNTCMEYK KMKHVSNMGL ALKKGAWTAG EDTLLRNYIE KYGEGKWHLV SMNSGLRRCR 60 KSCRLRWLNY LRPNIKRGDF EEDEVDLILR LHKLLGNRWS LIAGRIPGRT SNDVKNYWNT 120 HLRSYAKQQK KEPEDAKSSK DCTMVTIIKP QPHTLSKPLY WFKDDNQIVE THNNGTLIRS 180 SNDGVDNNYN MSPGLISSPT VLDNTINGFL KELFDEGEKI IDSEIGWSFD GSQTKGEALN 240 VAEDNENSFF DFSTDEVMWN LLDSEQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 1e-55 | MYB family protein |