PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024975280.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 338aa MW: 36243.1 Da PI: 8.6772

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024975280.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.9	2.3e-38	79	138	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e l+cprCdstntkfCyynnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+++ XP_024975280.1 79 EPGLNCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRNN 138 56789***************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MVFSSVPPYL DHHNWHIQLQ QSSHQEARVG GGENPNLPPP PPPPQPGGGG GGGGGGGEGS 60 IRPGSMVDRA RMAKLPMPEP GLNCPRCDST NTKFCYYNNY SLTQPRHFCK TCRRYWTRGG 120 ALRNVPVGGG CRRNKRNNKN RSSKSPSQTG PKSVSESPSR CSTETMATTH LPHPPSLQLP 180 FMSSLGQYGG VGGNISSNLG GFQPQNEMGN FQLGSGSSTG NNFNNILSIG GVENWRLPFL 240 AGFEVPSNTN LFHYQSEGAA EAPPLSMVGG DMRLPNSGFD STHEVDPPVK MEDNRSLNLS 300 RQFLGASETS NQQPWGGNAW AEFSGVNSTS STPTTHFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	9e-41	Dof family protein