PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975223.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | G2-like | ||||||||
Protein Properties | Length: 396aa MW: 45298.7 Da PI: 6.2775 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 98.3 | 5.5e-31 | 223 | 277 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LH+rFve+v+ LGG+ekAtPk+il+lm+ +gLt+ hvkSHLQkYR+ XP_024975223.1 223 KTRIRWTQDLHDRFVECVSCLGGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRI 277 68****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 43.4 | 7.8e-14 | 227 | 276 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT+++++++v++v lGg t+k+I + m +g+t ++ks++qky+ XP_024975223.1 227 RWTQDLHDRFVECVSCLGGAekaTPKAILKLMDsEGLTIFHVKSHLQKYR 276 9*****************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 396 aa Download sequence |
MNTLKIGCNH EMVYNMKSRE FGGATQQQPW QVGITILPSE MEAKETHQDH QQQQQEQDHQ 60 RQQMITYRQE NSSCSKTIME QIGSPSSALY ATEKYLGFSQ NGVHLSFNDE TDVSSVPQMK 120 FDAYMHPLEK PRDSFSFGSY ERPYKMRCNN PSERDQIMEL KRKLLDESDT SDWRQSQPSI 180 CYDGNQDLGG QFGHSGQTGR PPSGQVSINC ANPGTVGTIM PSKTRIRWTQ DLHDRFVECV 240 SCLGGAEKAT PKAILKLMDS EGLTIFHVKS HLQKYRIAKY LPESAKGNSE KRTSMDTISQ 300 IENITGMQFK DALQMQLAVQ RQLHEQLEIQ RNLQLRIEEQ AKQLKKMFDQ QQKANKSQNS 360 EITSLHDDHH AMNLEDDDIL NLEVDSENTL FPSKIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 4e-66 | G2-like family protein |