PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975213.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 234aa MW: 27676.3 Da PI: 6.6302 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.4 | 1.6e-13 | 35 | 71 | 11 | 48 |
HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 llv++vkq+G ++W+ Ia++++ R +kqc++rw++yl XP_024975213.1 35 LLVQLVKQHGDRNWACIAEKFP-LRAGKQCRDRWLNYL 71 89********************.9************97 PP | |||||||
2 | Myb_DNA-binding | 55.5 | 1.3e-17 | 77 | 119 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++W++e+d+ll++++kq+G++ W+ Iar+++ R+++++k++w+ XP_024975213.1 77 KNAWSEEDDKLLIELHKQFGNK-WAYIARMFP-ERSENSIKNHWN 119 689*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MEKPLMYQPI WANHSQLSKS MKTFSLNLHL KVNRLLVQLV KQHGDRNWAC IAEKFPLRAG 60 KQCRDRWLNY LRPNIMKNAW SEEDDKLLIE LHKQFGNKWA YIARMFPERS ENSIKNHWNA 120 TKRRQLSMNN NKNIKYPSLL KDYITSLTSS SSDDQINIQQ EPPVADTTTA PLEQPESSVF 180 DSIHHQSETS FWSDSVIGYK PEMVFDQNDF EFDLVDQLQF DPNAEREFLD MFCW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58850.1 | 2e-43 | MYB family protein |